Modules Overview

Metabuli provides the following command-line modules:

Module	Description
classify	Classify metagenomic reads against a reference database
refine-results	Refine classification results with additional filtering options
extract	Extract reads classified under a specific taxon
build	Build a custom reference database
updateDB	Add new sequences to an existing database

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General Usage

metabuli <module> [options]

Run metabuli without arguments or metabuli --help to see a list of all available modules.